BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F12SP1|AL428098
(1037 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig506 1218 0.0
>3x_Contig506
Length = 1733
Score = 1218 bits (613), Expect = 0.0
Identities = 663/675 (98%), Gaps = 5/675 (0%)
Strand = Plus / Plus
Query: 362 gttcggcccagtaaaatacgctttgccagtgattgataaagaaactggtttggcgaaggg 421
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 gttcggcccagtaaaatacgctttgccagtgattgataaaaaaactggtttggcgaaggg 60
Query: 422 tactgctttcgttgcattcagaagcgaagatgcttacaacgactgtctaaataatgctcc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tactgctttcgttgcattcagaagcgaagatgcttacaacgactgtctaaataatgctcc 120
Query: 482 tgctacaggaagtacatcccttctaataagtgatgatgtttccccagagtatgtttatga 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctacaggaagtacatcccttctaataagtgatgatgtttccccagagtatgtttatga 180
Query: 542 gggtcgtgttcttgcaatttctccaactcttgatagagaatctgctggaagaatgtttga 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggtcgtgttcttgcaatttctccaactcttgatagagaatctgctggaagaatgtttga 240
Query: 602 gagaratgccgagaagagaaaagaagttcttggtaaggcaccaggtgaaaaggacagacg 661
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagaaatgccgagaagagaaaagaagttcttggtaaggcaccaggtgaaaaggacagacg 300
Query: 662 taatctatatttgttaaatgaaggtagaattgttgcaggttcaaagctttcacagttgtt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taatctatatttgttaaatgaaggtagaattgttgcaggttcaaagctttcacagttgtt 360
Query: 722 aactcctgctgatatggaagtcagagaaaaatcttacaagttaagagtcgaacaattgaa 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aactcctgctgatatggaagtcagagaaaaatcttacaagttaagagtcgaacaattgaa 420
Query: 782 gaagaatccaacgttacatctttcgatgactagattggctatcagaaatattccaagagc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaagaatccaacgttacatctttcgatgactagattggctatcagaaatattccaagagc 480
Query: 842 aatgactgagaagggtctaaaggcgctastctgtaaagctgtagtagagttcgccaaaga 901
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 481 aatgactgagaagggtctaaaggcgctagctcgtaaagctgtagtagagttcgccaaaga 540
Query: 902 agttaacgaaaacaagagacacgcattgaataaagaagaaatcgtcagatctactaagg- 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agttaacgaaaacaagagacacgcattgaataaagaagaaatcgtcagatctactaagga 600
Query: 961 aaagtacaagttcatgtctgaagaag-aatcgaagctcaaaagadg-aggacaag-aaca 1017
|||||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||
Sbjct: 601 aaagtacaagttcatgtctgaagaagaaatcgaagctcaaaagaagaaggacaagaaaca 660
Query: 1018 aggta-tgttagaca 1031
||||| |||||||||
Sbjct: 661 aggtattgttagaca 675
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,804
Number of Sequences: 1807
Number of extensions: 12804
Number of successful extensions: 777
Number of sequences better than 1.0e-20: 1
length of query: 1037
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1021
effective length of database: 10,329,639
effective search space: 10546561419
effective search space used: 10546561419
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)